Upasana Ramphal

Reflective Evaluation of Next-Generation Sequencing Data during Early Phase Detection of the Delta Variant Persistent SARS-CoV-2 infection and intra-host evolution in association with advanced HIV infection (preprint) A year of genomic surveillance reveals how the SARS-CoV-2 pandemic unfolded in Africa. Rapid replacement of the Beta variant by the Delta variant in South Africa (preprint) Management and containment of a SARS-CoV-2 Beta variant outbreak at the Malawi University of Science and Technology Deciphering DNA Methylation in HIV Infection Emergence and phenotypic characterization of C.1.2, a globally detected lineage that rapidly accumulated mutations of concern Comparing SARS-CoV-2 sequencing methodologies during early phase detection of the Delta variant in South Africa Molecular Epidemiology and Diversity of SARS-CoV-2 in Ethiopia, 2020–2022 Molecular epidemiology of SARS-CoV-2 during five COVID-19 waves and the significance of low frequency lineage Global disparities in SARS-CoV-2 genomic surveillance Genomic epidemiology of SARS CoV-2 during the first four waves in Mozambique The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance Identification of SARS-CoV-2 Omicron variant using spike gene target failure and genotyping assays, Gauteng, South Africa, 2021