Publications

HIV-1C in-House RNA-Based Genotyping Assay for Detection of Drug Resistance Mutations in Samples with Low-Level Viral Loads

Authors O.T. Bareng, W.T. Choga, S.T. Maphorisa, S. Seselamarumo, K.K. Seatla, P.T. Mokgethi, D. Maruapula, M.L. Mogwele, D. Ditshwanelo, N.O. Moraka, I. Gobe, M.S. Motswaledi, J.M. Makhema, R. Musonda, R. Shapiro, M. Essex, V. Novitsky, S. Moyo, S. Gaseitsiwe
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Doravirine-associated resistance mutations in antiretroviral therapy naïve and experienced adults with HIV-1 subtype C infection in Botswana

Authors O.T. Bareng, S. Seselamarumo, K.K. Seatla, W.T. Choga, B. Bakae, D. Maruapula, N. Kelentse, N.O. Moraka, B. Mokaleng, P.T. Mokgethi, T.R. Ditlhako, M. Pretorius-Holme, M.B. Mbulawa, R. Lebelonyane, E.C. Bile, T. Gaolathe, R. Shapiro, J.M. Makhema, S. Lockman, M. Essex, V. Novitsky, S.W. Mpoloka, S. Moyo, S. Gaseitsiwe
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HIV specific CD8+ TRM-like cells in tonsils express exhaustive signatures in the absence of natural HIV control

Authors R. Fardoos, S.K. Nyquist, O.E. Asowata, S.W. Kazer, A. Singh, A. Ngoepe, J. Giandhari, N. Mthabela, D. Ramjit, S. Singh, F. Karim, S. Buus, F. Anderson, J.Z. Porterfield, A.L. Sibiya, R. Bipath, K. Moodley, W. Kuhn, B. Berger, S. Nguyen, T. de Oliveira, T. Ndung’u, P. Goulder, A.K. Shalek, A. Leslie, H.N. Kløverpris
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Antibody response durability following three-dose COVID-19 vaccination in people with HIV receiving suppressive ART

Authors H.R. Lapointe, F. Mwimanzi, P.K. Cheung, Y. Sang, F. Yaseen, S. Speckmaier, E. Barad, N. Moran-Garcia, S. Datwani, M.C. Duncan, R. Kalikawe, S. Ennis, L. Young, B. Ganase, F.H. Omondi, G. Umviligihozo, W. Dong, J. Toy, P. Sereda, L. Burns, C.T. Costiniuk, C. Cooper, A.H. Anis, V. Leung, D. Holmes, M.L. Demarco, J. Simons, M. Hedgcock, N. Prystaj...
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Subtle Longitudinal Alterations in Env Sequence Potentiate Differences in Sensitivity to Broadly Neutralizing Antibodies following Acute HIV-1 Subtype C Infection

Authors T. Mandizvo, N. Gumede, B. Ndlovu, S. Ndlovu, J.K. Mann, D.R. Chopera, L. Singh, K.L. Dong, B.D. Walker, Z.M. Ndhlovu, C.L. Lavine, M.S. Seaman, K. Gounder, T. Ndung’u
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The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance

Authors Tegally, H., San, J.E., Cotten, M., Moir, M., Tegomoh, B., Mboowa, G., Martin, D.P., Baxter, C., Lambisia, A.W., Diallo, A., Amoako, D.G., Diagne, M.M., Sisay, A., Zekri, A.-R.N., Gueye, A.S., Sangare, A.K., Ouedraogo, A.-S., Sow, A., Musa, A.O., Sesay, A.K., Abias, A.G., Elzagheid, A.I., Lagare, A., Kemi, A.-S., Abar, A.E., Johnson, A.A., Fowot...
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Doravirine Associated Resistance Mutations in Antiretroviral Therapy Naïve and Experienced Adults with HIV-1 subtype C Infection in Botswana

Authors Bareng, O.T., Seselamarumo, S., Seatla, K.K., Choga, W.T., Bakae, B., Maruapula, D., Kelentse, N., Moraka, N.O., Mokaleng, B., Mokgethi, P.T., Ditlhako, T.R., Pretorius-Holme, M., Mbulawa, M.B., Lebelonyane, R., Bile, E.C., Gaolathe, T., Shapiro, R., Makhema, J.M., Lockman, S., Essex, M., Novitsky, V., Mpoloka, S.W., Moyo, S., Gaseitsiwe, S.
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Modeling the Impact of HIV-1 Nucleic Acid Testing Among Symptomatic Adult Outpatients in Kenya

Authors Hamilton, D.T., Agutu, C., Babigumira, J.B., van der Elst, E., Hassan, A., Gichuru, E., Mugo, P., Farquhar, C., Ndung’u, T., Sirengo, M., Chege, W., Goodreau, S.M., Elder, A., Sanders, E.J., Graham, S.M.
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Low-frequency HIV-1 drug resistance mutations in antiretroviral naïve individuals in Botswana

Authors Maruapula, D., Seatla, K.K., Morerinyane, O., Molebatsi, K., Giandhari, J., de Oliveira, T., Musonda, R.M., Leteane, M., Mpoloka, S.W., Rowley, C.F., Moyo, S., Gaseitsiwe, S.
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HIV viremia is associated with compromised SARS-CoV-2 Beta variant neutralization

Authors Hwa, S.-H., Snyman, J., Bernstein, M., Ganga, Y., Cele, S., Muema, D., Tan, C.W., Khan, K., Karim, F., Hanekom, W., Bernstein, L., Kaufmann, S.H.E., Wang, L.-F., Ndung’u, T., Sigal, A.
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SANTHE is an Africa Health Research Institute (AHRI) flagship programme funded by the Science for Africa Foundation through the DELTAS Africa programme; the Gates Foundation; Gilead Sciences Inc.; and the Ragon Institute of Mass General, MIT, and Harvard.